ProtPred-GROMACS: Ab initio protein structure prediction framework which uses evolutionary algorithms to optimize objective functions such as potential energy, number of hydrogen bonds and solvent accessible surface area.
2PG: Faster and simpler algorithm in which one objective function is optimized 3PG: A more robust approach in which multiple objective functions are optimized at the same time
Protein Validation: Check the integrity of a PDB file Protein Desolvation: Remove a solvation layer around your protein.
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